57 lines
1.2 KiB
Plaintext
57 lines
1.2 KiB
Plaintext
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ARG BASE_CONTAINER=betalupi/jupyter-base
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FROM $BASE_CONTAINER
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LABEL maintainer="Mark <mark@betalupi.com>"
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# R pre-requisites
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USER root
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RUN apt-get update --yes && apt-get install --yes --no-install-recommends \
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fonts-dejavu \
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unixodbc \
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unixodbc-dev \
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r-cran-rodbc \
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gfortran \
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gcc && \
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apt-get clean && rm -rf /var/lib/apt/lists/*
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USER ${NB_UID}
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RUN mamba install --quiet --yes \
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"r-base" \
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"r-caret" \
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"r-crayon" \
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"r-devtools" \
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"r-e1071" \
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"r-forecast" \
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"r-hexbin" \
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"r-htmltools" \
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"r-htmlwidgets" \
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"r-irkernel" \
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"r-nycflights13" \
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"r-randomforest" \
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"r-rcurl" \
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"r-rmarkdown" \
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"r-rodbc" \
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"r-rsqlite" \
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"r-shiny" \
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"r-tidyverse" \
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"unixodbc" && \
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# Cleanup
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mamba clean --all -f -y && \
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npm cache clean --force && \
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jupyter lab clean && \
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rm -rf "/home/${NB_USER}/.cache/yarn" && \
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fix-permissions "${CONDA_DIR}" && \
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fix-permissions "/home/${NB_USER}"
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# `rpy2` and `r-tidymodels` are not easy to install under arm
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RUN set -x && \
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arch=$(uname -m) && \
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if [ "${arch}" == "x86_64" ]; then \
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mamba install --quiet --yes \
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"rpy2" \
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"r-tidymodels" && \
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mamba clean --all -f -y && \
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fix-permissions "${CONDA_DIR}" && \
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fix-permissions "/home/${NB_USER}"; \
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fi;
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USER ${NB_UID}
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