docker/jupyter/build/pymodules.Dockerfile

ARG BASE_CONTAINER=betalupi/jupyter-base
FROM $BASE_CONTAINER
LABEL maintainer="Mark <mark@betalupi.com>"

USER $NB_UID

RUN mamba install --yes \
		## Jupyter extensions
		"jupyter_server>=2.0.0" \
		## Python packages
		# Scraping
		"beautifulsoup4" \
		"requests" \
		"schedule" \
		# ML and Data
		"scikit-image" \
		"scikit-learn" \
		"scipy" \
		"seaborn" \
		"pandas" \
		"matplotlib-base" \
		# Misc
		"numpy" \
		"sympy" \
		"altair" \
		"bokeh" \
		"bottleneck" \
		"cloudpickle" \
		"conda-forge::blas=*=openblas" \
		"cython" \
		"dask" \
		"dill" \
		"h5py" \
		"ipympl" \
		"ipywidgets" \
		"numba" \
		"numexpr" \
		"patsy" \
		"protobuf" \
		"pytables" \
		"sqlalchemy" \
		"statsmodels" \
		"widgetsnbextension" \
		"xlrd" \
		"pytest" \
		"ipython" \
	&& \
	# Cleanup
	mamba clean --all -f -y && \
	npm cache clean --force && \
	jupyter lab clean && \
	rm -rf "/home/${NB_USER}/.cache/yarn" && \
	fix-permissions "${CONDA_DIR}" && \
	fix-permissions "/home/${NB_USER}"

# Import matplotlib once to build the font cache.
ENV XDG_CACHE_HOME="/home/${NB_USER}/.cache/"
RUN MPLBACKEND=Agg python -c "import matplotlib.pyplot" && \
	fix-permissions "/home/${NB_USER}"